ApeA

Contributors: Hugo Vaysset

Description

ApeA is a defense system composed of one protein, initially described as a member of the HEPN superfamily which groups proteins with nucleotide binding activity (CL0291).

ApeA is predicted to act via an abortive infection mechanism.

Molecular mechanism

As far as we are aware, the molecular mechanism is unknown.

Example of genomic structure

The Gao_Ape is composed of 1 protein: ApeA.

Here is an example found in the RefSeq database:

The Gao_Ape system in Enterobacter mori (GCF_018638795.1, NZ_CP071064) is composed of 1 protein: ApeA (WP_215231222.1)

Distribution of the system among prokaryotes

Among the NaN complete genomes of RefSeq, the Gao_Ape is detected in NaN genomes (NaN %). The system was detected in NaN different species.
phylum
Percent genome having the system
0
100
Minimum genomes count to display

Structure

Summary
Group
Structure
Foldseek
System
Gene name
Subtype
Proteins in structure
System genes
Prediction type
N genes in sys
pLDDT
iptm+ptm
pDockQ
No data available

Experimental validation

      
graph LR;
    Gao_2020[Gao et al., 2020] --> Origin_0
    Origin_0[Escherichia coli 
WP_000706972.1] --> Expressed_0[Escherichia coli]
    Expressed_0[Escherichia coli] ----> T2 & T4 & T5 & T3 & T7 & PhiV-1
    subgraph Title1[Reference]
        Gao_2020
end
    subgraph Title2[System origin]
        Origin_0
end
    subgraph Title3[Expression species]
        Expressed_0
end
    subgraph Title4[Protects against]
        T2
        T4
        T5
        T3
        T7
        PhiV-1
end
    style Title1 fill:none,stroke:none,stroke-width:none
    style Title2 fill:none,stroke:none,stroke-width:none
    style Title3 fill:none,stroke:none,stroke-width:none
    style Title4 fill:none,stroke:none,stroke-width:none