PD-T7-5
Contributors: Hugo Vaysset
Description
PD-T7-5 is a defense system composed of a single protein which was discovered in (N/A) . Its antiphage activity was assessed by heterologous expression in E. coli against T7 and to reduce the size of lysis plaques of T3 (N/A) . PD-T7-5 contains a PD(D/E)XK nuclease domain like PD-T7-1.
Molecular mechanism
As far as we are aware, the molecular mechanism is unknown. However, the presence of a PD(D/E)XK domain in PD-T7-5 suggests a mechanism of action via DNA degradation (N/A) .
Example of genomic structure
The PD-T7-5 system is composed of one protein: PD-T7-5.
Here is an example found in the RefSeq database:
The PD-T7-5 system in Shewanella putrefaciens (GCF_019599085.1, NZ_CP080633) is composed of 1 protein: PD-T7-5 (WP_220590848.1)
Distribution of the system among prokaryotes
Among the NaN complete genomes of RefSeq, the PD-T7-5 is detected in NaN genomes (NaN %). The system was detected in NaN different species.
phylum
Percent genome having the system
Minimum genomes count to display
Structure
Summary
Group | Structure | Foldseek | System | Gene name | Subtype | Proteins in structure | System genes | Prediction type | N genes in sys | pLDDT | iptm+ptm | pDockQ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| No data available | ||||||||||||