AbiH

Contributors: Florian Tesson

Description

AbiH a system discovered in 1996 (N/A) .

AbiH is one of the so-called "Abi" systems for "Abortive infection" discovered in the 90's in research related to the dairy industry (N/A) . Even though, their name corresponds to an abortive infection, their mechanism of action does not necessarily correspond to an abortive infection. For the abortive infection, phenotype AbiH is classified as unknown in (N/A) .

This system is a single gene system with no known domain (except its own PFAM).

Molecular mechanism

As far as we are aware, the molecular mechanism is unknown.

Example of genomic structure

The AbiH is composed of 1 protein: AbiH.

Here is an example found in the RefSeq database:

The AbiH system in Bacteroides faecium (GCF_012113595.1, NZ_CP050831) is composed of 1 protein: AbiH (WP_167962074.1)

Distribution of the system among prokaryotes

Among the NaN complete genomes of RefSeq, the AbiH is detected in NaN genomes (NaN %). The system was detected in NaN different species.
phylum
Percent genome having the system
0
100
Minimum genomes count to display

Structure

Summary
Group
Structure
Foldseek
System
Gene name
Subtype
Proteins in structure
System genes
Prediction type
N genes in sys
pLDDT
iptm+ptm
pDockQ
No data available

Experimental validation

      
graph LR;
    Prevost_1996[Chopin et al., 2005] --> Origin_0
    Origin_0[lactococci 
CAA66252.1] --> Expressed_0[lactococci]
    Expressed_0[lactococci] ----> 936 & c2
    subgraph Title1[Reference]
        Prevost_1996
end
    subgraph Title2[System origin]
        Origin_0
end
    subgraph Title3[Expression species]
        Expressed_0
end
    subgraph Title4[Protects against]
        936
        c2
end
    style Title1 fill:none,stroke:none,stroke-width:none
    style Title2 fill:none,stroke:none,stroke-width:none
    style Title3 fill:none,stroke:none,stroke-width:none
    style Title4 fill:none,stroke:none,stroke-width:none