AbiG

Contributors: Florian Tesson

Description

AbiG was discovered in 1996 on the plasmid pCI750 of Lactococcus lactis (N/A) .

AbiG is one of the so-called "Abi" systems for "Abortive infection" discovered in the 90's in research related to the dairy industry (N/A) . AbiG is classified as abortive infection in (N/A) .

AbiG is composed of two genes AbiGi and AbiGii.

Molecular mechanism

As far as we are aware, the molecular mechanism is unknown.

Example of genomic structure

The AbiG is composed of 2 proteins: AbiGi and AbiGii.

Here is an example found in the RefSeq database:

The AbiG system in Staphylococcus simulans (GCF_900474685.1, NZ_LS483313) is composed of 2 proteins AbiGi (WP_103364194.1) AbiGii (WP_070462993.1)

Distribution of the system among prokaryotes

Among the NaN complete genomes of RefSeq, the AbiG is detected in NaN genomes (NaN %). The system was detected in NaN different species.
phylum
Percent genome having the system
0
100
Minimum genomes count to display

Structure

Summary
Group
Structure
Foldseek
System
Gene name
Subtype
Proteins in structure
System genes
Prediction type
N genes in sys
pLDDT
iptm+ptm
pDockQ
No data available
Items per page:
10
0-0 of 0

Experimental validation

      
graph LR;
    Chopin_2005[Chopin et al., 2005] --> Origin_0
    Origin_0[lactococcal plasmid 
AAB38312.1, AAB38313.1] --> Expressed_0[lactococci]
    Expressed_0[lactococci] ----> 936 & c2 & P335
    subgraph Title1[Reference]
        Chopin_2005
end
    subgraph Title2[System origin]
        Origin_0
end
    subgraph Title3[Expression species]
        Expressed_0
end
    subgraph Title4[Protects against]
        936
        c2
        P335
end
    style Title1 fill:none,stroke:none,stroke-width:none
    style Title2 fill:none,stroke:none,stroke-width:none
    style Title3 fill:none,stroke:none,stroke-width:none
    style Title4 fill:none,stroke:none,stroke-width:none
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AbiE
AbiH