GAPS1

Contributors: Marian Dominguez-Mirazo

Description

The GAPS1 system is composed of a single protein. It was found in Gamma-Mobile-Trio (GMT) protein containing genomic island in Vibrio, and cloned into E. coli K-12 (N/A) . The name GAPS derives from the "GMT-encoded Anti-Phage System" acronym. GAPS1 contains a predicted nuclease domain whose mutation prevents defense activity, however DNA degradation was not detected in targeted phage (N/A) . Mutations in the folded capsid protein (Gp10) of phage T7 result in an escape phenotype, with GAPS1 shown to be activated upon Gp10 expression, suggesting activation of the system at late stages of the infection cycle (N/A) .

Molecular mechanisms

The molecular mechanism remains to be fully elucidated.

Example of genomic structure

The GAPS1 is composed of 1 protein: GAPS1.

Here is an example found in the RefSeq database:

gaps1

The GAPS1 system in Hydrogenophaga sp. BPS33 (GCF_009859475.1, NZ_CP044549) is composed of 1 protein: GAPS1 (WP_159591124.1)

Distribution of the system among prokaryotes

Structure

Experimental validation