MADS

To do

Example of genomic structure

The MADS is composed of 8 proteins: mad1, mad2, mad3, mad4, mad5, mad6, mad7 and mad8.

Here is an example found in the RefSeq database:

The MADS system in Pseudomonas otitidis (GCF_019879085.1, NZ_CP082244) is composed of 8 proteins mad1 (WP_058876992.1) mad2 (WP_208273447.1) mad3 (WP_208273444.1) mad4 (WP_208273442.1) mad5 (WP_208273440.1) mad6 (WP_208273438.1) mad7 (WP_208273430.1) mad8 (WP_233473447.1)

Distribution of the system among prokaryotes

Among the NaN complete genomes of RefSeq, the MADS is detected in NaN genomes (NaN %). The system was detected in NaN different species.
phylum
Percent genome having the system
0
100
Minimum genomes count to display

Structure

Summary
Group
Structure
Foldseek
System
Gene name
Subtype
Proteins in structure
System genes
Prediction type
N genes in sys
pLDDT
iptm+ptm
pDockQ
No data available
Items per page:
10
0-0 of 0

Experimental validation

      
graph LR;
    Maestri_2023[Maestri et al., 2023] --> Origin_0
    Origin_0[Pseudomonas aeruginosa 
WP_058876987.1, WP_058876988.1,
WP_058876989.1, WP_058876990.1,
WP_058876991.1, WP_058876992.1,
WP_124170283.1, WP_201267341.1] --> Expressed_0[Pseudomonas aeruginosa]
    Expressed_0[Pseudomonas aeruginosa] ----> DMS3vir
    subgraph Title1[Reference]
        Maestri_2023
end
    subgraph Title2[System origin]
        Origin_0
end
    subgraph Title3[Expression species]
        Expressed_0
end
    subgraph Title4[Protects against]
        DMS3vir
end
    style Title1 fill:none,stroke:none,stroke-width:none
    style Title2 fill:none,stroke:none,stroke-width:none
    style Title3 fill:none,stroke:none,stroke-width:none
    style Title4 fill:none,stroke:none,stroke-width:none
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