PD-Lambda-4

Example of genomic structure

The PD-Lambda-4 is composed of 2 proteins: PD-Lambda-4_A and PD-Lambda-4_B.

Here is an example found in the RefSeq database:

The PD-Lambda-4 system in Serratia sp. LS-1 (GCF_003719595.1, NZ_CP033504) is composed of 2 proteins PD-Lambda-4_B (WP_123061920.1) PD-Lambda-4_A (WP_123061921.1)

Distribution of the system among prokaryotes

Among the NaN complete genomes of RefSeq, the PD-Lambda-4 is detected in NaN genomes (NaN %). The system was detected in NaN different species.
phylum
Percent genome having the system
0
100
Minimum genomes count to display

Structure

Summary
Group
Structure
Foldseek
System
Gene name
Subtype
Proteins in structure
System genes
Prediction type
N genes in sys
pLDDT
iptm+ptm
pDockQ
No data available
Items per page:
10
0-0 of 0

Experimental validation

      
graph LR;
    Vassallo_2022[Vassallo et al., 2022] --> Origin_0
    Origin_0[Escherichia coli 
RCP47953.1, RCP47952.1] --> Expressed_0[Escherichia coli]
    Expressed_0[Escherichia coli] ----> T4 & LambdaVir & SECphi27 & T7
    subgraph Title1[Reference]
        Vassallo_2022
end
    subgraph Title2[System origin]
        Origin_0
end
    subgraph Title3[Expression species]
        Expressed_0
end
    subgraph Title4[Protects against]
        T4
        LambdaVir
        SECphi27
        T7
end
    style Title1 fill:none,stroke:none,stroke-width:none
    style Title2 fill:none,stroke:none,stroke-width:none
    style Title3 fill:none,stroke:none,stroke-width:none
    style Title4 fill:none,stroke:none,stroke-width:none
Edit on gitlab
PD-Lambda-3
PD-Lambda-5