Dpd

Example of genomic structure

The Dpd is composed of 15 proteins: DpdA, DpdB, DpdC, DpdD, DpdE, DpdF, DpdG, DpdH, DpdI, DpdJ, DpdK, QueC, QueD, QueE and FolE.

Here is an example found in the RefSeq database:

The Dpd system in Colwellia sp. PAMC 20917 (GCF_001767295.1, NZ_CP014944) is composed of 15 proteins FolE (WP_070374315.1) QueD (WP_070374318.1) DpdC (WP_070374319.1) DpdA (WP_070374320.1) DpdB (WP_070374321.1) QueC (WP_070374322.1) DpdD (WP_083277897.1) DpdK (WP_070374324.1) DpdJ (WP_070374325.1) DpdI (WP_070374326.1) DpdH (WP_070374327.1) DpdG (WP_070374328.1) DpdF (WP_070374329.1) DpdE (WP_070374330.1) QueE (WP_197517659.1)

Distribution of the system among prokaryotes

Among the 22,803 complete genomes of RefSeq, the Dpd is detected in 225 genomes (0.99 %).

The system was detected in 103 different species.

Proportion of genome encoding the Dpd system for the 14 phyla with more than 50 genomes in the RefSeq database.

Structure

Dpd

Example 1

References

10.1073/pnas.1518570113
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