PD-T7-2

Example of genomic structure

The PD-T7-2 is composed of 2 proteins: PD-T7-2_A and PD-T7-2_B.

Here is an example found in the RefSeq database:

The PD-T7-2 system in Lederbergia lenta (GCF_900478165.1, NZ_LS483476) is composed of 2 proteins PD-T7-2_A (WP_066145327.1) PD-T7-2_B (WP_066145329.1)

Distribution of the system among prokaryotes

Among the 22,803 complete genomes of RefSeq, the PD-T7-2 is detected in 1483 genomes (6.5 %).

The system was detected in 667 different species.

Proportion of genome encoding the PD-T7-2 system for the 14 phyla with more than 50 genomes in the RefSeq database.

Structure

PD-T7-2

Example 1

Experimental validation

      
graph LR;
    Vassallo_2022[Vassallo et al., 2022] --> Origin_0
    Origin_0[Escherichia coli 
RRM73498.1, RRM73410.1] --> Expressed_0[Escherichia coli]
    Expressed_0[Escherichia coli] ----> T2 & T4 & T6 & LambdaVir & T5 & SECphi18 & SECphi27 & T3 & T7
    subgraph Title1[Reference]
        Vassallo_2022
end
    subgraph Title2[System origin]
        Origin_0
end
    subgraph Title3[Expression species]
        Expressed_0
end
    subgraph Title4[Protects against]
        T2
        T4
        T6
        LambdaVir
        T5
        SECphi18
        SECphi27
        T3
        T7
end
    style Title1 fill:none,stroke:none,stroke-width:none
    style Title2 fill:none,stroke:none,stroke-width:none
    style Title3 fill:none,stroke:none,stroke-width:none
    style Title4 fill:none,stroke:none,stroke-width:none

    

References

10.1038/s41564-022-01219-4
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